I would think as long as the beam is not in the visible spectrum that it should be fine. But consult the FAA first, before doing anything.
Although, I did hear a story where a USMC plane buzzed a cop car in Texas that startled the cop so much he wrote to the nearby Naval/Marine base about the incident. Some Marine/Navy high up replied to the cop saying he is be the radar-guided weapon system didn't lock on to the cops radar gun.

I wouldn't think there were any live weapons on the jet, but it's funny nonetheless!